Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912331.1_cds_XP_016462387.1_55620
CDS Infomation

[gene=LOC107785570] [db_xref=GeneID:107785570] [protein=probable acyl-activating enzyme 17, peroxisomal] [protein_id=XP_016462387.1] [location=join(3528..3790,4203..4332,4452..4699,5777..5981,7032..7072,7248..7373,8044..8117,8946..9166,9718..9812,10090..10306,10900..11025,11104..11202,11353..11565,11638..11748)] [gbkey=CDS]
Sequence

ATGGCATATGAGAATTACAAAGGCATAGATTCCGTCACCGTCGCCGACGTTGAAGCTCTA
GGAATACCATCTGAACTCGCCGGAGAAATTCACAAAAAGCTCACCCGAATTGTTCGTAAT
TACGGTTCTACCACTCCCCAAACATGGCACCATATTTCCAAAGAACTGCTCAGCCCGAAA
CTCCCTTTCTCTTTACACCAGATGATGTACTATGGATGTTACAAGGATTTTGGGCCTGAC
CCGCCTGCTTGGTTACCCGACCAAAAAAACGCAGGTTTGACGAATATTGGTCAGCTTCTG
GAGAGGCGTGGAAAGGAGTTCTTGGGATCAAATTATGAAGACCCAATTTCTAGCTTCTCT
GATTTTCAAAGATTTTCAGTCTCCGAGCCAGAGGTATATTGGAAAACCATATTGGAGGAA
ATGAATGTTTCATTTTCAGTTCCTCCTGAATGTATTTTACGTGAGAGTCCATCTCATCCA
GGTGGTCAGTGGCTTCCTGGAGCACGAGTGAACCCAGCGAAGAATTGCCTCAGTTTTAGA
AAGAGTACTTTAAGTGATGTAGCCATAGTGTGGCGAAGTGAAGGAAATGACGAAGCACTT
GTTGAAAAAATGACCTTGAAGGAGTTATGTGAATCAGTTTGGGCAGTTGCATATGCTCTT
GAAACCCTGGGTTTGGAGAAAGGATCTGCCATAGCTATAGATATGCCGATGGATGTTAAT
TCTGTGGTGATCTACTTGGCTATTGTTCTTGCTGGTTATGTAGTTGTGTCAATTGCTGAT
AGTTTTGCTCCAAGAGAAATTTCGACAAGGCTCATGTTATCAAAAGCAAAAGCAATTTTT
ACGCAGGATTTTATTTTCCGTGGAGATAAAAAGATACCCTTGTACAGTCGAGTTGTTGAT
GCTCGTTCACCGACAGCAATTGTCATTCCCAATAGAGCCTCCAGCTTAAGCATACAATTA
CGTGATGGAGACATCTCTTGGCCTGACTTTTTAGAAAGAGTGAAAGATTCCAGGGGTCTC
GAGTTTGTTGCAGTAGAACAACCTATTACTGCATTTACAAACATTCTGTTCTCATCTGGC
ACAACAGGAGAGCCAAAGGCAATTCCATGGAGTCTCCTCTCACCTTTCAAGGCGGCTGCT
GATGGATGGTGCCATATGGATATCAAAAAAGGTGATGTGGTTGCTTGGCCCACTAATCTT
GGGTGGATGATGGGACCTTGGCTTGTTTATGCTTCACTATTGAATGGGGCGTCCATTGCC
TTGTATAATGGATCTCCCCTTGGTTCTGGCTTTGCTAAGTTTGTACAGGACGCTAAAGTA
ACTATGCTCGGGGTGATCCCAAGTATAGTGAGGACTTGGAAAGCGAAGAATTCTCCTGAT
GGCTTTGATTGGTCGACCATCCGTTGCTTTGGCTCCACTGGTGAGGCATCGAGCGTGGAT
GAATATCTATGGCTGATGGGAAGAGCTGAATATAAACCAATAATTGAGTATTGCGGCGGT
ACAGAGATTGGTGGCTCCTTTGTTTCTGGGTCATTGTTGCAGCCTCAGTCTTTAGCCGCT
TTCAGCACAGCAGTCATGGGATGTAGTCTTCATATTCTTGGGGACGATGGTCTTCCTATA
CCATCAGATGTTCCTGGGATTGGTGAATTGGCCCTTGGTCCTCTAATGTTTGGAGCTTCA
AGCACATTACTGAATGCGGACCACAATGAGATCTACTTCAAAGGAATGCCTGTTTTGAAT
GGAAAGGTTCTAAGAAGGCATGGGGATGTGTTTGAACGTACTTCTAAAGGATATTACCAT
GCACATGGTCGTGCAGATGATACAATGAACTTAGGGGGTATAAAGGTGAGTTCACTTGAG
ATTGAGCGCATATGCAATGCAGCAGATGAAAATATACTAGAAACAGCAGCAGTTGGAGTA
CCACCTGCTGGAGGTGGTCCTGAGAAGTTAGTAATTGCTGTCGTATTCAAGGATTCGGAT
AACTTGGAACACAATTTGGACACTTTGATGATTTCTTTCAATACAGCTTTGCAGAGAAAG
TTGAATCCTCTGTTCAAGGTTTCCAGTATTGTTCCTCTCCCTTCACTTCCAAGAACAGCA
ACAAATAAAGTTATGAGAAGGGTATTGAGGCAGCAGTTTTCTCAAGCAGATCAAGGTTCC
AAACTGTAA

Peptide Sequence

PEP ID

XP_016462387.1
PEP Infomation

PREDICTED: probable acyl-activating enzyme 17, peroxisomal [Nicotiana tabacum]
Sequence

MAYENYKGIDSVTVADVEALGIPSELAGEIHKKLTRIVRNYGSTTPQTWHHISKELLSPK
LPFSLHQMMYYGCYKDFGPDPPAWLPDQKNAGLTNIGQLLERRGKEFLGSNYEDPISSFS
DFQRFSVSEPEVYWKTILEEMNVSFSVPPECILRESPSHPGGQWLPGARVNPAKNCLSFR
KSTLSDVAIVWRSEGNDEALVEKMTLKELCESVWAVAYALETLGLEKGSAIAIDMPMDVN
SVVIYLAIVLAGYVVVSIADSFAPREISTRLMLSKAKAIFTQDFIFRGDKKIPLYSRVVD
ARSPTAIVIPNRASSLSIQLRDGDISWPDFLERVKDSRGLEFVAVEQPITAFTNILFSSG
TTGEPKAIPWSLLSPFKAAADGWCHMDIKKGDVVAWPTNLGWMMGPWLVYASLLNGASIA
LYNGSPLGSGFAKFVQDAKVTMLGVIPSIVRTWKAKNSPDGFDWSTIRCFGSTGEASSVD
EYLWLMGRAEYKPIIEYCGGTEIGGSFVSGSLLQPQSLAAFSTAVMGCSLHILGDDGLPI
PSDVPGIGELALGPLMFGASSTLLNADHNEIYFKGMPVLNGKVLRRHGDVFERTSKGYYH
AHGRADDTMNLGGIKVSSLEIERICNAADENILETAAVGVPPAGGGPEKLVIAVVFKDSD
NLEHNLDTLMISFNTALQRKLNPLFKVSSIVPLPSLPRTATNKVMRRVLRQQFSQADQGS
KL

Transcript Sequence

Gene sequence data has not been registered.